BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC009330
Symbol
 Calx
Product
 Sodium/calcium exchanger 3-like Protein
NCBI Equivalent
662969
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head8.3 ± 0.63.53.5 ± 0.41.8
Brain5.5 ± 0.82.34.2 ± 0.72.1
Anterior Midgut0.2 ± 0.10.10.6 ± 0.3n.a.
Posterior Midgut0.2 ± 0.10.10.7 ± 0.1n.a.
Hindgut1.5 ± 0.10.61.4 ± 0.4n.a.
Tubules (Free)0.4 ± 0.10.20.4 ± 0.1n.a.
Perirectal Tubules6.7 ± 0.82.8  
Rectum8.2 ± 0.63.5  
Rectal complex4.3 ± 0.81.82.6 ± 0.21.3
Fat Body0.5 ± 0.20.20.4 ± 0.2n.a.
Male Gonads0.4 ± 0.20.2  
Female Gonads0.8 ± 0.40.3  
Carcass3.3 ± 0.91.42.6 ± 0.71.3
Whole Body2.4 ± 0.72.0 ± 1.1
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC009330-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0093300.6 ± 0.00.2 ± 0.00.1 ± 0.00.5 ± 0.1
TC009330-RA0.6 ± 0.00.2 ± 0.00.1 ± 0.00.5 ± 0.1
0–1 h1–24 h24–36 h36–72 h0246810FPKM