BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC009340

Symbol
Rbsn-5

Product
Rabenosyn-5-like Protein

NCBI Equivalent
662552

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	5.7 ± 0.5	0.9	4.5 ± 0.9	1.0
Brain	5.6 ± 0.6	0.9	4.4 ± 0.1	1.0
Anterior Midgut	4.2 ± 0.5	0.6	5.3 ± 0.8	1.2
Posterior Midgut	3.9 ± 0.5	0.6	6.3 ± 0.7	1.5
Hindgut	3.7 ± 1.5	0.6	3.2 ± 0.2	0.7
Tubules (Free)	6.8 ± 0.7	1.1	6.8 ± 1.0	1.6
Perirectal Tubules	6.9 ± 0.4	1.1
Rectum	6.5 ± 0.9	1.0
Rectal complex	6.9 ± 0.4	1.1	7.3 ± 0.1	1.7
Fat Body	3.4 ± 1.3	0.5	3.3 ± 1.2	0.8
Male Gonads	4.6 ± 0.8	0.7
Female Gonads	3.9 ± 0.3	0.6
Carcass	3.3 ± 0.2	0.5	2.8 ± 0.8	0.7

Whole Body	6.4 ± 0.4		4.3 ± 0.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009340-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009340	6.4 ± 1.0	4.0 ± 0.2	3.4 ± 0.3	3.9 ± 0.4

TC009340-RA	6.4 ± 1.0	4.0 ± 0.2	3.4 ± 0.3	3.9 ± 0.4