BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC009348

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	36 ± 2.2	0.5	114 ± 34	1.3
Brain	67 ± 5.3	0.9	207 ± 17	2.4
Anterior Midgut	355 ± 15	4.6	295 ± 76	3.4
Posterior Midgut	418 ± 23	5.4	216 ± 24	2.5
Hindgut	410 ± 93	5.3	227 ± 182	2.6
Tubules (Free)	55 ± 3.4	0.7	48 ± 2.8	0.6
Perirectal Tubules	108 ± 49	1.4
Rectum	95 ± 8.1	1.2
Rectal complex	67 ± 6.3	0.9	76 ± 1.9	0.9
Fat Body	590 ± 104	7.6	622 ± 277	7.2
Male Gonads	733 ± 42	9.4
Female Gonads	236 ± 5.8	3.0
Carcass	299 ± 99	3.9	452 ± 168	5.2

Whole Body	78 ± 13		86 ± 44

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009348-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009348	1352 ± 343	2001 ± 530	2457 ± 1005	1880 ± 413

TC009348-RA	1352 ± 343	2001 ± 530	2457 ± 1005	1880 ± 413