BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC009462

Symbol
LOC661602

Product
Ras-related protein Rab6-like Protein

NCBI Equivalent
661602

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	5.0 ± 0.6	0.7	5.3 ± 0.4	0.5
Brain	5.2 ± 0.7	0.7	5.0 ± 0.2	0.5
Anterior Midgut	59 ± 3.9	7.8	57 ± 1.7	5.4
Posterior Midgut	57 ± 6.8	7.7	39 ± 4.2	3.6
Hindgut	5.6 ± 1.3	0.7	6.2 ± 0.9	0.6
Tubules (Free)	9.2 ± 1.6	1.2	18 ± 0.6	1.7
Perirectal Tubules	5.4 ± 1.2	0.7
Rectum	5.3 ± 0.7	0.7
Rectal complex	6.4 ± 0.7	0.9	7.1 ± 0.6	0.7
Fat Body	23 ± 9.2	3.1	3.8 ± 2.3	0.4
Male Gonads	3.4 ± 0.6	0.5
Female Gonads	3.8 ± 0.4	0.5
Carcass	2.5 ± 0.3	0.3	4.1 ± 1.2	0.4

Whole Body	7.5 ± 1.5		11 ± 3.1

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009462-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009462	14 ± 1.0	20 ± 1.5	17 ± 1.1	13 ± 3.4

TC009462-RA	14 ± 1.0	20 ± 1.5	17 ± 1.1	13 ± 3.4