BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC009486

Symbol
CtsK1

Product
cathepsin L precursor

NCBI Equivalent
663234

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	105 ± 6.6	1.0	24 ± 5.6	0.1
Brain	132 ± 5.8	1.3	309 ± 46	1.2
Anterior Midgut	2263 ± 696	22	4644 ± 1407	18
Posterior Midgut	451 ± 154	4.5	678 ± 378	2.6
Hindgut	36 ± 25	0.4	16 ± 5.8	0.1
Tubules (Free)	2.2 ± 0.4	0.0	3.4 ± 0.6	0.0
Perirectal Tubules	9.3 ± 1.1	0.1
Rectum	5.7 ± 0.8	0.1
Rectal complex	8.8 ± 1.5	0.1	14 ± 3.0	0.1
Fat Body	177 ± 26	1.7	700 ± 134	2.7
Male Gonads	26 ± 5.8	0.3
Female Gonads	71 ± 12	0.7
Carcass	260 ± 42	2.6	43 ± 12	0.2

Whole Body	101 ± 6.8		260 ± 44

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009486-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009486	7.9 ± 0.5	42 ± 3.3	51 ± 6.0	35 ± 5.8

TC009486-RA	7.9 ± 0.5	42 ± 3.3	51 ± 6.0	35 ± 5.8