BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC009487

Symbol
Txl

Product
Thioredoxin-like protein 1

NCBI Equivalent
663358

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	24 ± 2.1	0.7	75 ± 18	1.8
Brain	13 ± 1.1	0.4	19 ± 3.6	0.5
Anterior Midgut	152 ± 9.4	4.1	62 ± 2.5	1.5
Posterior Midgut	149 ± 17	4.0	58 ± 5.7	1.4
Hindgut	47 ± 12	1.3	44 ± 12	1.0
Tubules (Free)	62 ± 0.5	1.7	62 ± 3.7	1.5
Perirectal Tubules	24 ± 3.0	0.7
Rectum	22 ± 1.0	0.6
Rectal complex	37 ± 3.8	1.0	46 ± 6.1	1.1
Fat Body	66 ± 9.4	1.8	63 ± 21	1.5
Male Gonads	82 ± 17	2.2
Female Gonads	79 ± 9.4	2.1
Carcass	59 ± 27	1.6	55 ± 19	1.3

Whole Body	37 ± 1.8		42 ± 3.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009487-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009487	120 ± 4.1	130 ± 14	120 ± 9.7	87 ± 11

TC009487-RA	120 ± 4.1	130 ± 14	120 ± 9.7	87 ± 11