BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC009495

Symbol
LOC663655

Product
hydroxysteroid (17-beta) dehydrogenase 4

NCBI Equivalent
663655

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	79 ± 1.8	1.3	47 ± 6.6	0.6
Brain	36 ± 0.2	0.6	34 ± 1.3	0.5
Anterior Midgut	548 ± 100	9.1	555 ± 164	7.6
Posterior Midgut	337 ± 12	5.6	164 ± 29	2.3
Hindgut	46 ± 14	0.8	34 ± 11	0.5
Tubules (Free)	53 ± 1.7	0.9	51 ± 2.9	0.7
Perirectal Tubules	24 ± 2.7	0.4
Rectum	32 ± 1.0	0.5
Rectal complex	34 ± 1.0	0.6	31 ± 2.6	0.4
Fat Body	283 ± 74	4.7	1234 ± 357	17
Male Gonads	33 ± 3.6	0.5
Female Gonads	68 ± 11	1.1
Carcass	464 ± 233	7.7	83 ± 29	1.1

Whole Body	61 ± 5.5		73 ± 8.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009495-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009495	53 ± 8.8	38 ± 3.0	27 ± 3.7	41 ± 7.0

TC009495-RA	53 ± 8.8	38 ± 3.0	27 ± 3.7	41 ± 7.0