BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC009546

Symbol
LOC660727

Product
TBC1 domain family member 31-like Protein

NCBI Equivalent
660727

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	4.7 ± 0.2	0.4	4.7 ± 0.6	1.0
Brain	4.3 ± 0.2	0.4	4.1 ± 0.1	0.9
Anterior Midgut	2.0 ± 0.2	0.2	2.4 ± 0.2	0.5
Posterior Midgut	1.9 ± 0.5	0.2	2.9 ± 0.3	0.6
Hindgut	1.6 ± 0.2	0.1	2.1 ± 0.8	0.5
Tubules (Free)	5.3 ± 0.2	0.5	6.0 ± 0.2	1.3
Perirectal Tubules	2.2 ± 0.3	0.2
Rectum	3.1 ± 0.3	0.3
Rectal complex	2.9 ± 0.2	0.2	3.2 ± 0.1	0.7
Fat Body	9.2 ± 3.4	0.8	1.5 ± 0.7	0.3
Male Gonads	14 ± 5.0	1.2
Female Gonads	4.5 ± 0.4	0.4
Carcass	1.9 ± 0.3	0.2	2.1 ± 0.6	0.5

Whole Body	12 ± 1.1		4.6 ± 0.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009546-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009546	2.5 ± 0.3	0.9 ± 0.2	0.7 ± 0.1	1.0 ± 0.6

TC009546-RA	2.5 ± 0.3	0.9 ± 0.2	0.7 ± 0.1	1.0 ± 0.6