BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC009582

Symbol
enc

Product
encore

NCBI Equivalent
100142242

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	8.0 ± 2.6	2.3	4.8 ± 1.1	1.4
Brain	0.6 ± 0.1	0.2	0.4 ± 0.1	0.1
Anterior Midgut	0.2 ± 0.1	0.0	0.2 ± 0.0	0.1
Posterior Midgut	0.2 ± 0.2	0.1	0.2 ± 0.1	0.1
Hindgut	0.2 ± 0.1	0.1	0.3 ± 0.1	0.1
Tubules (Free)	2.3 ± 0.0	0.7	3.1 ± 0.1	0.9
Perirectal Tubules	7.5 ± 2.0	2.2
Rectum	5.6 ± 0.4	1.6
Rectal complex	5.0 ± 0.8	1.5	4.3 ± 0.3	1.3
Fat Body	0.4 ± 0.0	0.1	0.2 ± 0.0	0.1
Male Gonads	0.3 ± 0.1	0.1
Female Gonads	0.3 ± 0.0	0.1
Carcass	0.4 ± 0.0	0.1	0.5 ± 0.1	0.1

Whole Body	3.5 ± 0.6		3.3 ± 0.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009582-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009582	3.4 ± 0.1	2.1 ± 0.2	0.9 ± 0.3	0.8 ± 0.2

TC009582-RA	3.4 ± 0.1	2.1 ± 0.2	0.9 ± 0.3	0.8 ± 0.2