BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC009631

Symbol
Vha44

Product
V-type proton ATPase subunit C-like Protein

NCBI Equivalent
661302

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	43 ± 2.3	0.8	52 ± 15	0.7
Brain	278 ± 12	5.3	137 ± 16	1.7
Anterior Midgut	475 ± 83	9.1	470 ± 100	5.9
Posterior Midgut	393 ± 43	7.5	297 ± 67	3.7
Hindgut	460 ± 257	8.8	466 ± 266	5.8
Tubules (Free)	260 ± 9.5	5.0	258 ± 33	3.2
Perirectal Tubules	991 ± 259	19
Rectum	231 ± 6.1	4.4
Rectal complex	482 ± 24	9.2	491 ± 79	6.1
Fat Body	88 ± 7.3	1.7	74 ± 20	0.9
Male Gonads	123 ± 17	2.3
Female Gonads	107 ± 9.8	2.0
Carcass	69 ± 3.4	1.3	69 ± 7.3	0.9

Whole Body	52 ± 5.5		80 ± 31

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009631-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009631	31 ± 2.4	16 ± 1.8	14 ± 2.0	13 ± 2.8

TC009631-RA	31 ± 2.4	16 ± 1.8	14 ± 2.0	13 ± 2.8