BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC009690

NCBI Equivalent
not available

Fly Homologues
none identified

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	24 ± 3.0	0.9	21 ± 5.1	0.4
Brain	3.2 ± 0.1	0.1	3.4 ± 0.6	0.1
Anterior Midgut	34 ± 4.6	1.2	66 ± 15	1.3
Posterior Midgut	41 ± 8.3	1.5	134 ± 9.9	2.7
Hindgut	37 ± 8.8	1.3	44 ± 8.3	0.9
Tubules (Free)	27 ± 1.7	1.0	24 ± 1.6	0.5
Perirectal Tubules	13 ± 6.5	0.5
Rectum	29 ± 4.4	1.1
Rectal complex	27 ± 1.3	1.0	26 ± 2.5	0.5
Fat Body	24 ± 11	0.9	439 ± 124	8.9
Male Gonads	7.5 ± 0.8	0.3
Female Gonads	17 ± 2.8	0.6
Carcass	79 ± 25	2.9	47 ± 8.4	1.0

Whole Body	28 ± 0.3		49 ± 7.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009690-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009690	4.8 ± 0.5	1.5 ± 0.1	0.2 ± 0.1	1.1 ± 0.3

TC009690-RA	4.8 ± 0.5	1.5 ± 0.1	0.2 ± 0.1	1.1 ± 0.3