BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC009845

Symbol
CD98hc

Product
Neutral and basic amino acid transport protein rBAT-like Protein

iBeetle-Base
TC009845

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	36 ± 1.4	1.8	24 ± 3.8	1.3
Brain	102 ± 2.9	5.1	128 ± 6.1	6.8
Anterior Midgut	56 ± 7.1	2.8	61 ± 4.2	3.2
Posterior Midgut	75 ± 7.2	3.7	73 ± 4.0	3.9
Hindgut	75 ± 23	3.8	106 ± 59	5.7
Tubule	13 ± 0.3	0.7	11 ± 0.9	0.6
Perirectal Tubules	27 ± 4.1	1.4
Rectal complex	22 ± 1.1	1.1	28 ± 1.2	1.5
Rectum	38 ± 4.0	1.9
Fat Body	24 ± 2.1	1.2	47 ± 17	2.5
Male Gonads	33 ± 1.5	1.6
Female Gonads	27 ± 0.5	1.4
Carcass	56 ± 14	2.8	32 ± 14	1.7

Whole Body	20 ± 1.6		19 ± 3.0

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009845-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009845	13 ± 2.0	30 ± 4.7	11 ± 0.5	14 ± 1.0

TC009845-RA	13 ± 2.0	30 ± 4.7	11 ± 0.5	14 ± 1.0