BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC009883

Symbol
LOC660426

Product
Beta-mannosidase-like Protein

NCBI Equivalent
660426

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	1.1 ± 0.3	0.5	1.6 ± 0.2	0.3
Brain	0.5 ± 0.0	0.2	0.5 ± 0.0	0.1
Anterior Midgut	3.8 ± 0.4	1.6	22 ± 3.8	4.5
Posterior Midgut	1.4 ± 0.1	0.6	8.5 ± 2.1	1.7
Hindgut	0.5 ± 0.1	0.2	0.8 ± 0.4	0.2
Tubules (Free)	5.2 ± 0.7	2.2	3.0 ± 0.1	0.6
Perirectal Tubules	2.6 ± 0.5	1.1
Rectum	2.4 ± 0.2	1.0
Rectal complex	1.7 ± 0.1	0.7	1.3 ± 0.1	0.3
Fat Body	1.2 ± 0.3	0.5	0.9 ± 0.2	0.2
Male Gonads	0.4 ± 0.1	0.2
Female Gonads	0.1 ± 0.1	0.0
Carcass	0.6 ± 0.3	0.3	0.8 ± 0.1	0.2

Whole Body	2.3 ± 0.6		5.0 ± 1.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009883-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009883	0.1 ± 0.0	0.4 ± 0.0	0.5 ± 0.1	0.8 ± 0.5

TC009883-RA	0.1 ± 0.0	0.4 ± 0.0	0.5 ± 0.1	0.8 ± 0.5