BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC009916

Symbol
Clbn

Product
Nuclear export mediator factor NEMF homolog-like Protein

NCBI Equivalent
662550

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	6.9 ± 0.3	0.7	7.0 ± 0.7	1.1
Brain	11 ± 0.8	1.0	9.3 ± 1.1	1.5
Anterior Midgut	6.0 ± 0.8	0.6	6.1 ± 0.8	1.0
Posterior Midgut	5.7 ± 1.1	0.5	7.7 ± 0.6	1.3
Hindgut	7.0 ± 1.2	0.7	7.8 ± 0.6	1.3
Tubules (Free)	12 ± 0.1	1.1	10 ± 0.1	1.7
Perirectal Tubules	8.2 ± 0.2	0.8
Rectum	8.1 ± 0.3	0.8
Rectal complex	7.6 ± 0.3	0.7	7.2 ± 0.2	1.2
Fat Body	9.3 ± 1.2	0.9	5.0 ± 1.1	0.8
Male Gonads	18 ± 1.9	1.7
Female Gonads	6.2 ± 1.0	0.6
Carcass	5.5 ± 0.2	0.5	7.0 ± 1.9	1.1

Whole Body	10 ± 0.8		6.1 ± 0.7

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009916-RA
TC009916-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009916	6.5 ± 0.7	5.1 ± 0.3	6.8 ± 0.9	5.3 ± 1.4

TC009916-RA	1.3 ± 0.7	0.8 ± 0.1	1.1 ± 0.1	1.5 ± 0.9
TC009916-RB	5.2 ± 1.3	4.3 ± 0.3	5.7 ± 1.0	3.8 ± 0.9