BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC009935

Symbol
didum

Product
Unconventional myosin-Vb-like Protein

NCBI Equivalent
663516

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	12 ± 1.0	2.3	2.4 ± 0.6	0.5
Brain	6.2 ± 0.5	1.2	2.8 ± 0.5	0.6
Anterior Midgut	3.8 ± 0.3	0.7	3.2 ± 0.3	0.6
Posterior Midgut	3.7 ± 0.3	0.7	5.1 ± 0.4	1.0
Hindgut	0.5 ± 0.3	0.1	0.4 ± 0.1	0.1
Tubules (Free)	12 ± 0.6	2.3	16 ± 0.4	3.3
Perirectal Tubules	5.9 ± 2.1	1.1
Rectum	2.7 ± 0.2	0.5
Rectal complex	2.9 ± 0.6	0.5	1.9 ± 0.1	0.4
Fat Body	1.1 ± 0.6	0.2	0.1 ± 0.0	0.0
Male Gonads	0.4 ± 0.1	0.1
Female Gonads	3.3 ± 0.7	0.6
Carcass	0.5 ± 0.5	0.1	0.6 ± 0.2	0.1

Whole Body	5.3 ± 1.1		5.1 ± 3.1

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009935-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009935	22 ± 6.8	4.8 ± 0.3	0.8 ± 0.1	1.4 ± 0.3

TC009935-RA	22 ± 6.8	4.8 ± 0.3	0.8 ± 0.1	1.4 ± 0.3