BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC009965

Symbol
Rab1

Product
Ras-related protein Rab-3-like Protein

NCBI Equivalent
664036

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	84 ± 2.1	0.9	117 ± 13	1.2
Brain	256 ± 15	2.6	247 ± 9.1	2.4
Anterior Midgut	633 ± 43	6.5	543 ± 21	5.4
Posterior Midgut	585 ± 70	6.0	432 ± 95	4.3
Hindgut	361 ± 174	3.7	409 ± 224	4.0
Tubules (Free)	148 ± 17	1.5	148 ± 10	1.5
Perirectal Tubules	137 ± 6.8	1.4
Rectum	153 ± 11	1.6
Rectal complex	86 ± 3.6	0.9	111 ± 3.3	1.1
Fat Body	256 ± 72	2.6	528 ± 151	5.2
Male Gonads	469 ± 55	4.8
Female Gonads	228 ± 14	2.3
Carcass	442 ± 62	4.5	326 ± 77	3.2

Whole Body	97 ± 8.6		101 ± 7.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009965-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009965	64 ± 3.7	119 ± 28	141 ± 34	100 ± 42

TC009965-RA	64 ± 3.7	119 ± 28	141 ± 34	100 ± 42