BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC009996

Symbol
LOC664400

Product
Ribosomal RNA small subunit methyltransferase NEP1-like Protein

iBeetle-Base
TC009996

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
No paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	2.6 ± 0.2	0.7	7.0 ± 1.7	1.4
Brain	1.2 ± 0.3	0.3	1.9 ± 0.4	0.4
Anterior Midgut	11 ± 1.6	3.1	4.8 ± 0.9	1.0
Posterior Midgut	13 ± 3.1	3.6	4.2 ± 0.6	0.9
Hindgut	4.7 ± 2.1	1.3	4.3 ± 0.4	0.9
Tubule	5.2 ± 0.3	1.5	4.0 ± 0.2	0.8
Perirectal Tubules	9.6 ± 1.5	2.7
Rectal complex	6.1 ± 0.6	1.7	5.6 ± 0.3	1.2
Rectum	6.0 ± 0.3	1.7
Fat Body	3.4 ± 0.3	0.9	5.5 ± 1.5	1.1
Male Gonads	2.7 ± 1.3	0.8
Female Gonads	10 ± 2.1	2.9
Carcass	3.2 ± 0.7	0.9	4.5 ± 0.3	0.9

Whole Body	3.6 ± 0.1		4.8 ± 1.1

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009996-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009996	33 ± 3.5	56 ± 4.9	41 ± 4.4	22 ± 2.4

TC009996-RA	33 ± 3.5	56 ± 4.9	41 ± 4.4	22 ± 2.4