BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC009998

Symbol
LOC664411

Product
Eukaryotic initiation factor 4A-like Protein

NCBI Equivalent
664411

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	27 ± 0.4	1.2	58 ± 13	2.0
Brain	27 ± 1.4	1.2	25 ± 2.3	0.8
Anterior Midgut	32 ± 1.7	1.5	27 ± 3.4	0.9
Posterior Midgut	33 ± 2.0	1.5	24 ± 2.5	0.8
Hindgut	18 ± 1.3	0.8	19 ± 0.8	0.6
Tubules (Free)	36 ± 0.9	1.7	33 ± 0.4	1.1
Perirectal Tubules	29 ± 0.7	1.3
Rectum	30 ± 2.0	1.4
Rectal complex	35 ± 2.4	1.6	37 ± 1.9	1.3
Fat Body	11 ± 0.9	0.5	16 ± 3.1	0.6
Male Gonads	14 ± 0.2	0.7
Female Gonads	16 ± 1.6	0.8
Carcass	14 ± 2.1	0.6	18 ± 2.9	0.6

Whole Body	22 ± 1.4		29 ± 3.8

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009998-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009998	45 ± 2.6	79 ± 12	99 ± 5.7	79 ± 13

TC009998-RA	45 ± 2.6	79 ± 12	99 ± 5.7	79 ± 13