BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC010029

Symbol
Lpin

Product
Phosphatidate phosphatase LPIN3-like Protein

NCBI Equivalent
664486

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	32 ± 2.9	3.3	7.9 ± 3.1	0.5
Brain	40 ± 0.1	4.1	31 ± 1.4	1.9
Anterior Midgut	7.0 ± 0.5	0.7	14 ± 2.3	0.8
Posterior Midgut	7.5 ± 0.4	0.8	13 ± 1.3	0.8
Hindgut	5.8 ± 2.1	0.6	7.1 ± 2.5	0.4
Tubules (Free)	6.2 ± 1.2	0.6	6.3 ± 0.3	0.4
Perirectal Tubules	12 ± 4.5	1.3
Rectum	28 ± 2.3	2.9
Rectal complex	18 ± 5.2	1.8	18 ± 2.3	1.1
Fat Body	6.2 ± 0.8	0.6	8.6 ± 4.2	0.5
Male Gonads	8.0 ± 1.1	0.8
Female Gonads	14 ± 1.2	1.5
Carcass	35 ± 4.9	3.6	14 ± 0.8	0.9

Whole Body	9.8 ± 0.3		16 ± 6.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC010029-RA
TC010029-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC010029	8.2 ± 0.8	3.4 ± 0.3	1.1 ± 0.2	2.2 ± 0.5

TC010029-RA	8.1 ± 0.8	3.4 ± 0.3	1.1 ± 0.2	2.2 ± 0.5
TC010029-RB	0.0 ± 0.0	0.1 ± 0.0	0.0 ± 0.0	0.0 ± 0.0