BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC010040
Symbol
 LOC664529
Product
 Patj homolog-like Protein
NCBI Equivalent
664529
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head9.5 ± 1.11.87.9 ± 2.01.6
Brain13 ± 0.12.59.4 ± 0.32.0
Anterior Midgut1.6 ± 0.20.33.2 ± 0.70.7
Posterior Midgut1.8 ± 0.30.32.5 ± 0.30.5
Hindgut2.9 ± 0.40.53.6 ± 0.30.7
Tubules (Free)5.3 ± 0.31.05.2 ± 0.31.1
Perirectal Tubules6.7 ± 0.41.3  
Rectum6.0 ± 0.21.1  
Rectal complex5.2 ± 0.61.04.5 ± 0.70.9
Fat Body3.9 ± 0.80.72.0 ± 0.80.4
Male Gonads1.8 ± 0.60.3  
Female Gonads16 ± 1.52.9  
Carcass6.8 ± 0.81.37.4 ± 2.61.5
Whole Body5.3 ± 1.44.8 ± 0.2
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC010040-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0100406.0 ± 0.52.6 ± 0.30.9 ± 0.11.5 ± 0.3
TC010040-RA6.0 ± 0.52.6 ± 0.30.9 ± 0.11.5 ± 0.3
0–1 h1–24 h24–36 h36–72 h0246810FPKM