BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC010228
Symbol
 RfC4
Product
 replication factor C 40kD subunit
NCBI Equivalent
656317
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head6.7 ± 0.80.615 ± 1.61.7
Brain7.9 ± 0.30.78.1 ± 1.30.9
Anterior Midgut8.5 ± 0.60.77.9 ± 1.50.9
Posterior Midgut9.0 ± 1.10.87.5 ± 0.20.9
Hindgut5.3 ± 0.80.45.3 ± 0.10.6
Tubules (Free)7.8 ± 0.90.78.7 ± 0.11.0
Perirectal Tubules7.9 ± 0.10.7  
Rectum7.8 ± 0.90.7  
Rectal complex8.9 ± 1.00.78.8 ± 1.01.0
Fat Body9.4 ± 2.50.86.3 ± 0.90.7
Male Gonads16 ± 2.41.4  
Female Gonads15 ± 1.51.3  
Carcass4.3 ± 0.30.44.9 ± 0.60.6
Whole Body12 ± 1.58.7 ± 0.6
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC010228-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC01022833 ± 1.046 ± 6.047 ± 5.627 ± 4.7
TC010228-RA33 ± 1.046 ± 6.047 ± 5.627 ± 4.7
0–1 h1–24 h24–36 h36–72 h0102030405060FPKM