BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC010404

Symbol
pbl

Product
Protein ECT2-like Protein

NCBI Equivalent
661950

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	12 ± 0.2	0.8	9.8 ± 1.3	0.6
Brain	7.9 ± 0.8	0.5	8.8 ± 1.1	0.6
Anterior Midgut	6.5 ± 0.4	0.4	7.5 ± 0.6	0.5
Posterior Midgut	7.1 ± 0.8	0.5	7.8 ± 0.8	0.5
Hindgut	27 ± 11	1.8	48 ± 3.2	3.1
Tubules (Free)	50 ± 0.3	3.3	46 ± 3.7	2.9
Perirectal Tubules	13 ± 4.7	0.8
Rectum	31 ± 2.4	2.1
Rectal complex	25 ± 1.2	1.6	19 ± 3.0	1.2
Fat Body	13 ± 2.5	0.9	16 ± 7.2	1.0
Male Gonads	19 ± 6.3	1.3
Female Gonads	8.5 ± 2.0	0.6
Carcass	15 ± 3.5	1.0	14 ± 2.4	0.9

Whole Body	15 ± 1.7		16 ± 0.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC010404-RA
TC010404-RB
TC010404-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC010404	1.7 ± 0.0	1.8 ± 0.1	1.9 ± 0.3	1.3 ± 0.4

TC010404-RA	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0
TC010404-RB	0.9 ± 0.1	0.6 ± 0.1	0.7 ± 0.3	0.3 ± 0.1
TC010404-RC	0.8 ± 0.1	1.1 ± 0.1	1.2 ± 0.4	1.0 ± 0.3