BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC010406

Symbol
LOC103314939

Product
grain

NCBI Equivalent
103314939

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	0.4 ± 0.2	0.1	0.0 ± 0.0	0.0
Brain	0.0 ± 0.0	0.0	0.0 ± 0.0	0.0
Anterior Midgut	30 ± 4.3	7.6	28 ± 3.4	10
Posterior Midgut	32 ± 4.8	8.3	28 ± 3.2	10
Hindgut	0.1 ± 0.0	0.0	0.1 ± 0.1	0.0
Tubules (Free)	8.4 ± 1.1	2.1	6.5 ± 1.1	2.4
Perirectal Tubules	4.4 ± 2.2	1.1
Rectum	0.1 ± 0.1	0.0
Rectal complex	1.2 ± 0.1	0.3	0.7 ± 0.2	0.3
Fat Body	0.4 ± 0.3	0.1	0.0 ± 0.0	0.0
Male Gonads	0.1 ± 0.1	0.0
Female Gonads	0.6 ± 0.5	0.2
Carcass	0.0 ± 0.0	0.0	0.0 ± 0.0	0.0

Whole Body	3.9 ± 0.3		2.7 ± 0.8

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC010406-RA
TC010406-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC010406	0.0 ± 0.0	0.1 ± 0.0	0.1 ± 0.0	0.3 ± 0.1

TC010406-RA	0.0 ± 0.0	0.1 ± 0.0	0.1 ± 0.0	0.2 ± 0.1
TC010406-RB	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.1