BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC010442

Symbol
LOC659619

Product
Proteasome subunit alpha type-5-like Protein

NCBI Equivalent
659619

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	21 ± 1.4	0.8	92 ± 23	2.1
Brain	8.2 ± 0.6	0.3	13 ± 2.4	0.3
Anterior Midgut	113 ± 8.3	4.1	73 ± 14	1.6
Posterior Midgut	117 ± 12	4.2	60 ± 11	1.4
Hindgut	22 ± 2.2	0.8	25 ± 7.6	0.6
Tubules (Free)	40 ± 4.2	1.5	37 ± 2.7	0.8
Perirectal Tubules	30 ± 3.6	1.1
Rectum	24 ± 2.3	0.9
Rectal complex	32 ± 4.9	1.2	36 ± 1.2	0.8
Fat Body	37 ± 6.8	1.3	34 ± 3.9	0.8
Male Gonads	49 ± 11	1.8
Female Gonads	34 ± 3.5	1.2
Carcass	56 ± 25	2.0	55 ± 29	1.2

Whole Body	28 ± 3.5		44 ± 4.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC010442-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC010442	37 ± 1.1	67 ± 9.0	101 ± 18	61 ± 8.5

TC010442-RA	37 ± 1.1	67 ± 9.0	101 ± 18	61 ± 8.5