BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC010635
Symbol
 RtcB
Product
 tRNA-splicing ligase RtcB homolog-like Protein
NCBI Equivalent
658169
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head4.3 ± 0.90.710 ± 2.02.2
Brain9.9 ± 0.51.58.2 ± 0.71.7
Anterior Midgut6.6 ± 0.51.04.6 ± 0.61.0
Posterior Midgut8.0 ± 0.91.25.7 ± 0.51.2
Hindgut2.5 ± 0.80.44.1 ± 0.30.9
Tubules (Free)4.2 ± 0.10.65.9 ± 0.41.2
Perirectal Tubules8.6 ± 0.11.3  
Rectum6.0 ± 0.60.9  
Rectal complex7.0 ± 0.61.16.9 ± 0.61.4
Fat Body5.5 ± 0.60.84.0 ± 1.30.8
Male Gonads7.0 ± 1.61.1  
Female Gonads9.4 ± 0.51.4  
Carcass3.2 ± 1.00.53.9 ± 2.70.8
Whole Body6.5 ± 1.04.8 ± 2.3
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC010635-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC01063512 ± 0.87.5 ± 0.67.3 ± 0.26.5 ± 0.1
TC010635-RA12 ± 0.87.5 ± 0.67.3 ± 0.26.5 ± 0.1
0–1 h1–24 h24–36 h36–72 h05101520FPKM