BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC010661
Symbol
 LOC655400
Product
 E3 ubiquitin-protein ligase rififylin-like Protein
NCBI Equivalent
655400
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head5.8 ± 0.60.66.5 ± 0.51.0
Brain11 ± 1.11.29.4 ± 0.51.5
Anterior Midgut6.4 ± 0.20.713 ± 1.42.1
Posterior Midgut7.3 ± 0.70.813 ± 1.22.1
Hindgut10 ± 0.51.111 ± 0.61.7
Tubules (Free)7.7 ± 0.30.86.4 ± 0.41.0
Perirectal Tubules9.5 ± 0.81.0  
Rectum8.0 ± 0.20.9  
Rectal complex9.7 ± 0.81.07.5 ± 0.61.2
Fat Body8.3 ± 0.60.911 ± 6.11.8
Male Gonads9.9 ± 0.31.1  
Female Gonads31 ± 4.03.3  
Carcass8.0 ± 1.50.95.0 ± 1.10.8
Whole Body9.3 ± 0.56.3 ± 1.5
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC010661-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC01066128 ± 1.613 ± 0.88.2 ± 0.97.5 ± 1.3
TC010661-RA28 ± 1.613 ± 0.88.2 ± 0.97.5 ± 1.3
0–1 h1–24 h24–36 h36–72 h051015202530FPKM