BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC010937

NCBI Equivalent
not available

Fly Homologues
none identified

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	1.5 ± 0.5	0.0	1.8 ± 2.5	0.0
Brain	0.0 ± 0.0	0.0	0.0 ± 0.0	0.0
Anterior Midgut	526 ± 89	6.1	9001 ± 1586	17
Posterior Midgut	6244 ± 486	72	22276 ± 1029	42
Hindgut	4.4 ± 1.1	0.1	0.5 ± 0.2	0.0
Tubules (Free)	0.0 ± 0.1	0.0	0.2 ± 0.2	0.0
Perirectal Tubules	0.4 ± 0.3	0.0
Rectum	0.7 ± 0.2	0.0
Rectal complex	3.6 ± 3.5	0.0	5.3 ± 4.8	0.0
Fat Body	24 ± 11	0.3	0.5 ± 0.1	0.0
Male Gonads	2.5 ± 4.3	0.0
Female Gonads	1.7 ± 0.2	0.0
Carcass	0.3 ± 0.5	0.0	6.0 ± 5.2	0.0

Whole Body	87 ± 16		524 ± 186

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC010937-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC010937	0.2 ± 0.1	0.2 ± 0.1	0.0 ± 0.0	0.0 ± 0.0

TC010937-RA	0.2 ± 0.1	0.2 ± 0.1	0.0 ± 0.0	0.0 ± 0.0