BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC010945

Symbol
l(2)37Cd

Product
General transcription factor 3C polypeptide 5-like Protein

NCBI Equivalent
100142203

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	4.7 ± 0.2	0.6	5.0 ± 0.8	1.0
Brain	4.1 ± 0.5	0.6	5.2 ± 0.5	1.0
Anterior Midgut	5.5 ± 0.4	0.7	4.1 ± 0.7	0.8
Posterior Midgut	4.7 ± 0.5	0.6	5.3 ± 0.6	1.0
Hindgut	4.3 ± 0.3	0.6	4.0 ± 0.4	0.8
Tubules (Free)	7.5 ± 0.3	1.0	5.6 ± 0.2	1.1
Perirectal Tubules	5.4 ± 0.5	0.7
Rectum	4.9 ± 0.4	0.7
Rectal complex	6.2 ± 0.4	0.8	5.9 ± 0.6	1.2
Fat Body	5.5 ± 0.6	0.7	3.4 ± 1.1	0.7
Male Gonads	8.0 ± 0.8	1.1
Female Gonads	8.4 ± 0.4	1.1
Carcass	2.5 ± 0.5	0.3	3.1 ± 0.6	0.6

Whole Body	7.5 ± 0.6		5.1 ± 0.8

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC010945-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC010945	6.2 ± 0.8	4.4 ± 0.2	3.9 ± 0.1	2.9 ± 0.1

TC010945-RA	6.2 ± 0.8	4.4 ± 0.2	3.9 ± 0.1	2.9 ± 0.1