BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC010947

Symbol
LOC658824

NCBI Equivalent
658824

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	6.9 ± 0.9	1.0	29 ± 2.5	0.9
Brain	1.8 ± 0.1	0.3	10 ± 2.4	0.3
Anterior Midgut	0.7 ± 0.2	0.1	1.9 ± 0.8	0.1
Posterior Midgut	1.7 ± 0.2	0.3	20 ± 5.7	0.6
Hindgut	62 ± 24	9.4	40 ± 14	1.2
Tubules (Free)	30 ± 1.6	4.6	20 ± 0.5	0.6
Perirectal Tubules	19 ± 2.5	2.9
Rectum	27 ± 2.4	4.1
Rectal complex	27 ± 1.1	4.2	73 ± 18	2.2
Fat Body	3.8 ± 0.3	0.6	3.6 ± 1.0	0.1
Male Gonads	3.3 ± 0.3	0.5
Female Gonads	3.8 ± 0.5	0.6
Carcass	8.0 ± 0.8	1.2	56 ± 14	1.7

Whole Body	6.6 ± 0.2		33 ± 17

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC010947-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC010947	0.2 ± 0.1	1.5 ± 0.2	0.4 ± 0.1	4.9 ± 0.7

TC010947-RA	0.2 ± 0.1	1.5 ± 0.2	0.4 ± 0.1	4.9 ± 0.7