BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC011025

Symbol
Vha16-1

Product
V-type proton ATPase 16 kDa proteolipid subunit-like Protein

iBeetle-Base
TC011025

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	128 ± 6.8	1.1	159 ± 37	0.7
Brain	449 ± 30	3.9	324 ± 2.4	1.4
Anterior Midgut	1141 ± 143	9.8	1240 ± 91	5.3
Posterior Midgut	1024 ± 79	8.8	690 ± 72	3.0
Hindgut	568 ± 306	4.9	860 ± 270	3.7
Tubule	716 ± 34	6.2	725 ± 94	3.1
Perirectal Tubules	1746 ± 376	15
Rectal complex	1037 ± 22	9.0	1123 ± 335	4.8
Rectum	579 ± 41	5.0
Fat Body	62 ± 12	0.5	123 ± 37	0.5
Male Gonads	40 ± 2.3	0.3
Female Gonads	89 ± 8.0	0.8
Carcass	137 ± 25	1.2	154 ± 8.9	0.7

Whole Body	116 ± 5.0		232 ± 131

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC011025-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC011025	30 ± 1.3	39 ± 5.0	31 ± 2.4	37 ± 10

TC011025-RA	30 ± 1.3	39 ± 5.0	31 ± 2.4	37 ± 10