BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC011097

NCBI Equivalent
not available

Fly Homologues
none identified

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	1.4 ± 0.3	0.3	0.9 ± 0.8	0.0
Brain	0.1 ± 0.0	0.0	0.2 ± 0.0	0.0
Anterior Midgut	0.7 ± 0.6	0.1	0.4 ± 0.4	0.0
Posterior Midgut	1.0 ± 0.1	0.2	2.2 ± 0.3	0.1
Hindgut	109 ± 26	22	100 ± 32	5.4
Tubules (Free)	222 ± 13	44	261 ± 8.6	14
Perirectal Tubules	69 ± 7.1	14
Rectum	72 ± 9.6	14
Rectal complex	61 ± 6.4	12	48 ± 14	2.6
Fat Body	0.5 ± 0.3	0.1	4.1 ± 1.8	0.2
Male Gonads	0.5 ± 0.6	0.1
Female Gonads	0.1 ± 0.1	0.0
Carcass	1.1 ± 0.5	0.2	1.6 ± 1.4	0.1

Whole Body	5.0 ± 0.4		19 ± 17

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC011097-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC011097	0.8 ± 0.2	0.4 ± 0.2	0.3 ± 0.1	0.7 ± 0.3

TC011097-RA	0.8 ± 0.2	0.4 ± 0.2	0.3 ± 0.1	0.7 ± 0.3