BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC011183

Symbol
RpLP0-like

Product
mRNA turnover protein 4 homolog-like Protein

NCBI Equivalent
655416

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.9 ± 0.2	0.5	15 ± 5.3	2.0
Brain	1.9 ± 0.2	0.3	3.9 ± 0.7	0.5
Anterior Midgut	33 ± 4.4	4.5	10 ± 3.5	1.3
Posterior Midgut	30 ± 2.3	4.1	11 ± 1.4	1.4
Hindgut	5.7 ± 2.0	0.8	4.4 ± 1.1	0.6
Tubules (Free)	6.7 ± 0.6	0.9	5.8 ± 0.2	0.7
Perirectal Tubules	3.3 ± 0.6	0.4
Rectum	2.9 ± 0.3	0.4
Rectal complex	6.4 ± 0.4	0.9	8.2 ± 0.2	1.0
Fat Body	7.3 ± 2.0	1.0	8.6 ± 2.9	1.1
Male Gonads	5.7 ± 0.9	0.8
Female Gonads	29 ± 0.7	3.9
Carcass	5.5 ± 1.2	0.7	5.2 ± 2.1	0.7

Whole Body	7.4 ± 1.1		7.8 ± 2.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC011183-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC011183	60 ± 11	82 ± 7.8	45 ± 7.6	18 ± 5.1

TC011183-RA	60 ± 11	82 ± 7.8	45 ± 7.6	18 ± 5.1