BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC011349
Symbol
 Cpap3-e
Product
 Chondroitin proteoglycan 2-like Protein
NCBI Equivalent
661032
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head17 ± 1.44.347 ± 170.7
Brain0.2 ± 0.10.01.2 ± 0.50.0
Anterior Midgut0.1 ± 0.10.00.4 ± 0.40.0
Posterior Midgut0.1 ± 0.10.00.8 ± 0.20.0
Hindgut37 ± 109.138 ± 1.40.6
Tubules (Free)0.3 ± 0.10.10.2 ± 0.10.0
Perirectal Tubules6.6 ± 8.31.6  
Rectum36 ± 3.38.9  
Rectal complex35 ± 3.18.546 ± 110.7
Fat Body0.9 ± 0.10.21.4 ± 1.40.0
Male Gonads0.3 ± 0.00.1  
Female Gonads0.5 ± 0.50.1  
Carcass27 ± 126.6449 ± 2616.9
Whole Body4.0 ± 0.765 ± 85
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC011349-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0113490.0 ± 0.00.5 ± 0.11.5 ± 0.43.6 ± 1.0
TC011349-RA0.0 ± 0.00.5 ± 0.11.5 ± 0.43.6 ± 1.0
0–1 h1–24 h24–36 h36–72 h0246810FPKM