BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC011404
Symbol
 Raf
Product
 Raf homolog serine/threonine-protein kinase phl-like Protein
NCBI Equivalent
655334
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head2.9 ± 0.80.77.3 ± 0.91.6
Brain13 ± 0.13.010 ± 0.92.4
Anterior Midgut17 ± 2.14.026 ± 1.95.9
Posterior Midgut16 ± 1.03.618 ± 1.94.1
Hindgut3.7 ± 0.90.95.7 ± 0.11.3
Tubules (Free)5.5 ± 0.41.35.7 ± 0.41.3
Perirectal Tubules5.5 ± 0.91.3  
Rectum6.0 ± 0.61.4  
Rectal complex6.3 ± 0.21.55.0 ± 0.31.1
Fat Body6.1 ± 1.01.44.0 ± 1.40.9
Male Gonads7.0 ± 2.01.6  
Female Gonads21 ± 2.44.9  
Carcass5.1 ± 1.61.25.0 ± 1.91.1
Whole Body4.3 ± 0.44.4 ± 1.7
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC011404-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0114046.1 ± 0.73.0 ± 0.32.4 ± 0.42.0 ± 0.2
TC011404-RA6.1 ± 0.73.0 ± 0.32.4 ± 0.42.0 ± 0.2
0–1 h1–24 h24–36 h36–72 h0246810FPKM