BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC011417

Symbol
LOC657243

Product
Innexin inx2-like Protein

NCBI Equivalent
657243

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	24 ± 0.9	1.5	101 ± 30	1.8
Brain	71 ± 7.1	4.5	177 ± 44	3.1
Anterior Midgut	8.6 ± 1.6	0.5	31 ± 7.1	0.5
Posterior Midgut	8.7 ± 0.6	0.5	34 ± 5.6	0.6
Hindgut	73 ± 41	4.6	229 ± 163	4.0
Tubules (Free)	28 ± 8.6	1.8	26 ± 2.7	0.5
Perirectal Tubules	30 ± 2.2	1.9
Rectum	18 ± 0.4	1.1
Rectal complex	18 ± 0.6	1.1	49 ± 22	0.9
Fat Body	172 ± 81	11	202 ± 73	3.6
Male Gonads	27 ± 5.5	1.7
Female Gonads	50 ± 8.1	3.1
Carcass	146 ± 43	9.1	120 ± 23	2.1

Whole Body	16 ± 1.2		57 ± 6.8

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC011417-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC011417	12 ± 1.6	128 ± 21	177 ± 22	159 ± 18

TC011417-RA	12 ± 1.6	128 ± 21	177 ± 22	159 ± 18