BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC011524

Symbol
l(3)04053

NCBI Equivalent
103314883

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	5.0 ± 0.3	1.2	4.6 ± 0.1	1.1
Brain	9.8 ± 0.6	2.3	7.6 ± 0.2	1.9
Anterior Midgut	2.2 ± 0.1	0.5	2.8 ± 0.1	0.7
Posterior Midgut	1.8 ± 0.4	0.4	3.1 ± 0.5	0.8
Hindgut	4.6 ± 0.5	1.1	5.9 ± 1.7	1.5
Tubules (Free)	4.2 ± 0.2	1.0	5.2 ± 0.6	1.3
Perirectal Tubules	5.4 ± 0.5	1.3
Rectum	4.8 ± 0.5	1.1
Rectal complex	4.8 ± 0.5	1.1	4.5 ± 0.3	1.1
Fat Body	4.6 ± 1.1	1.1	3.4 ± 0.6	0.8
Male Gonads	7.7 ± 1.2	1.8
Female Gonads	5.4 ± 0.2	1.3
Carcass	3.5 ± 0.4	0.8	3.6 ± 0.3	0.9

Whole Body	4.2 ± 0.3		4.1 ± 1.0

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC011524-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC011524	10 ± 0.9	6.2 ± 0.3	4.2 ± 0.4	4.9 ± 0.2

TC011524-RA	10 ± 0.9	6.2 ± 0.3	4.2 ± 0.4	4.9 ± 0.2