BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC011543

Symbol
LOC658905

Product
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3-like Protein

NCBI Equivalent
658905

Fly Homologues
none identified

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	13 ± 1.2	1.5	11 ± 0.6	1.1
Brain	54 ± 6.2	6.1	39 ± 3.3	3.8
Anterior Midgut	28 ± 1.3	3.1	29 ± 0.7	2.9
Posterior Midgut	27 ± 0.7	3.0	29 ± 2.5	2.8
Hindgut	39 ± 5.2	4.3	40 ± 2.8	4.0
Tubules (Free)	26 ± 1.7	3.0	30 ± 0.6	3.0
Perirectal Tubules	40 ± 9.1	4.5
Rectum	20 ± 1.8	2.2
Rectal complex	24 ± 1.0	2.8	25 ± 3.4	2.5
Fat Body	16 ± 3.5	1.8	7.6 ± 3.2	0.8
Male Gonads	23 ± 2.1	2.6
Female Gonads	18 ± 1.3	2.0
Carcass	11 ± 1.9	1.3	16 ± 2.7	1.6

Whole Body	8.9 ± 0.4		10 ± 1.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC011543-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC011543	18 ± 1.2	15 ± 1.5	18 ± 1.7	21 ± 4.1

TC011543-RA	18 ± 1.2	15 ± 1.5	18 ± 1.7	21 ± 4.1