BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC011604
NCBI Equivalent
 not available
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head0.5 ± 0.1n.a.1.2 ± 0.80.2
Brain0.4 ± 0.2n.a.0.3 ± 0.10.0
Anterior Midgut6.8 ± 0.63.45.8 ± 1.10.9
Posterior Midgut4.8 ± 1.12.47.1 ± 0.81.1
Hindgut0.6 ± 0.2n.a.1.0 ± 0.50.2
Tubules (Free)0.0 ± 0.0n.a.0.0 ± 0.00.0
Perirectal Tubules2.2 ± 0.61.1  
Rectum0.6 ± 0.1n.a.  
Rectal complex0.8 ± 0.1n.a.0.4 ± 0.10.1
Fat Body0.4 ± 0.2n.a.0.1 ± 0.20.0
Male Gonads0.4 ± 0.1n.a.  
Female Gonads3.1 ± 0.71.5  
Carcass0.2 ± 0.2n.a.25 ± 6.83.8
Whole Body1.6 ± 0.36.7 ± 4.2
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC011604-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC01160413 ± 0.93.8 ± 0.10.3 ± 0.11.4 ± 0.5
TC011604-RA13 ± 0.93.8 ± 0.10.3 ± 0.11.4 ± 0.5
0–1 h1–24 h24–36 h36–72 h05101520FPKM