BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC011687

Symbol
LOC660070

Product
Transcription factor E2f-like Protein

NCBI Equivalent
660070

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	16 ± 0.4	0.7	25 ± 0.5	1.3
Brain	24 ± 0.6	1.1	27 ± 2.4	1.4
Anterior Midgut	24 ± 1.4	1.1	22 ± 2.6	1.1
Posterior Midgut	25 ± 3.5	1.1	22 ± 0.7	1.1
Hindgut	24 ± 4.3	1.1	22 ± 1.5	1.1
Tubules (Free)	18 ± 1.6	0.8	17 ± 0.3	0.9
Perirectal Tubules	29 ± 2.1	1.3
Rectum	23 ± 0.3	1.1
Rectal complex	27 ± 2.3	1.2	26 ± 0.2	1.3
Fat Body	24 ± 6.8	1.1	26 ± 4.3	1.4
Male Gonads	42 ± 4.2	1.9
Female Gonads	49 ± 5.1	2.3
Carcass	21 ± 3.4	1.0	25 ± 2.2	1.3

Whole Body	22 ± 0.5		20 ± 1.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC011687-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC011687	111 ± 10	123 ± 12	166 ± 28	80 ± 9.5

TC011687-RA	111 ± 10	123 ± 12	166 ± 28	80 ± 9.5