BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC011863

Symbol
LOC107397415

Product
Leukocyte surface antigen CD53-like Protein

NCBI Equivalent
107397415

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	19 ± 2.0	3.6	42 ± 16	3.7
Brain	17 ± 0.1	3.2	7.4 ± 1.4	0.7
Anterior Midgut	0.8 ± 0.2	0.2	1.7 ± 1.0	0.2
Posterior Midgut	0.9 ± 0.1	0.2	2.3 ± 0.2	0.2
Hindgut	19 ± 4.3	3.6	22 ± 1.0	1.9
Tubules (Free)	7.9 ± 1.8	1.5	22 ± 2.8	2.0
Perirectal Tubules	27 ± 7.4	5.2
Rectum	25 ± 1.9	4.8
Rectal complex	25 ± 1.8	4.8	39 ± 12	3.4
Fat Body	2.4 ± 0.3	0.5	3.3 ± 1.8	0.3
Male Gonads	7.4 ± 1.9	1.4
Female Gonads	1.1 ± 0.8	0.2
Carcass	12 ± 3.1	2.3	17 ± 6.5	1.5

Whole Body	5.3 ± 0.9		11 ± 2.0

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC011863-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC011863	0.6 ± 0.1	4.5 ± 0.3	5.4 ± 1.8	59 ± 12

TC011863-RA	0.6 ± 0.1	4.5 ± 0.3	5.4 ± 1.8	59 ± 12