BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC011912

Symbol
LOC662657

Product
Sideroflexin-3-like Protein

NCBI Equivalent
662657

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	18 ± 1.3	0.6	4.3 ± 1.1	0.1
Brain	70 ± 1.6	2.3	68 ± 5.4	1.6
Anterior Midgut	375 ± 42	12	267 ± 32	6.4
Posterior Midgut	278 ± 47	9.1	135 ± 6.7	3.3
Hindgut	62 ± 12	2.0	116 ± 12	2.8
Tubules (Free)	22 ± 2.6	0.7	25 ± 4.2	0.6
Perirectal Tubules	25 ± 6.3	0.8
Rectum	57 ± 7.6	1.9
Rectal complex	31 ± 1.9	1.0	44 ± 6.0	1.1
Fat Body	98 ± 29	3.2	207 ± 94	5.0
Male Gonads	65 ± 3.4	2.1
Female Gonads	29 ± 3.5	0.9
Carcass	100 ± 9.3	3.3	49 ± 44	1.2

Whole Body	31 ± 1.5		42 ± 19

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC011912-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC011912	39 ± 4.0	49 ± 3.0	20 ± 2.3	27 ± 2.8

TC011912-RA	39 ± 4.0	49 ± 3.0	20 ± 2.3	27 ± 2.8