BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC011953

Symbol
Kaz

Product
Macrophage erythroblast attacher-like Protein

NCBI Equivalent
656236

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	13 ± 0.2	0.9	19 ± 0.7	1.2
Brain	42 ± 0.7	2.9	31 ± 1.1	1.9
Anterior Midgut	72 ± 5.0	5.1	55 ± 2.8	3.4
Posterior Midgut	76 ± 4.0	5.3	50 ± 3.6	3.1
Hindgut	17 ± 2.3	1.2	24 ± 0.8	1.5
Tubules (Free)	12 ± 0.4	0.9	14 ± 0.7	0.8
Perirectal Tubules	18 ± 0.7	1.3
Rectum	17 ± 1.5	1.2
Rectal complex	15 ± 0.6	1.0	15 ± 0.6	1.0
Fat Body	30 ± 3.7	2.1	18 ± 4.5	1.1
Male Gonads	23 ± 2.7	1.6
Female Gonads	55 ± 3.1	3.8
Carcass	24 ± 3.1	1.7	26 ± 10	1.6

Whole Body	14 ± 0.3		16 ± 3.1

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC011953-RA
TC011953-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC011953	54 ± 4.5	41 ± 3.3	29 ± 2.8	23 ± 4.0

TC011953-RA	0.5 ± 0.1	4.9 ± 0.5	5.7 ± 0.1	5.8 ± 1.2
TC011953-RB	53 ± 4.4	36 ± 2.8	24 ± 2.7	17 ± 4.0