BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC012056

Symbol
LOC656876

NCBI Equivalent
656876

Fly Homologues
none identified

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	10 ± 1.3	0.4	13 ± 1.3	1.0
Brain	25 ± 2.1	1.0	41 ± 1.9	3.2
Anterior Midgut	56 ± 6.0	2.2	39 ± 2.9	3.1
Posterior Midgut	61 ± 6.2	2.4	31 ± 3.0	2.5
Hindgut	20 ± 2.9	0.8	12 ± 2.4	1.0
Tubules (Free)	6.7 ± 1.3	0.3	6.3 ± 1.0	0.5
Perirectal Tubules	6.9 ± 1.8	0.3
Rectum	5.5 ± 1.0	0.2
Rectal complex	10 ± 1.4	0.4	13 ± 0.5	1.0
Fat Body	58 ± 19	2.3	18 ± 6.5	1.5
Male Gonads	164 ± 21	6.4
Female Gonads	159 ± 17	6.2
Carcass	17 ± 4.6	0.7	18 ± 2.9	1.4

Whole Body	26 ± 1.3		13 ± 1.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC012056-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC012056	510 ± 78	695 ± 154	694 ± 169	182 ± 32

TC012056-RA	510 ± 78	695 ± 154	694 ± 169	182 ± 32