BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC012080

Symbol
LOC660275

Product
CUGBP Elav-like family member 1

iBeetle-Base
TC012080

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	22 ± 4.0	0.3	13 ± 3.1	0.9
Brain	189 ± 34	2.5	172 ± 5.6	12
Anterior Midgut	49 ± 3.7	0.7	40 ± 3.1	2.7
Posterior Midgut	47 ± 5.6	0.6	38 ± 4.8	2.6
Hindgut	45 ± 21	0.6	26 ± 11	1.8
Tubule	37 ± 2.9	0.5	54 ± 1.7	3.7
Perirectal Tubules	31 ± 5.9	0.4
Rectal complex	21 ± 1.5	0.3	16 ± 1.1	1.1
Rectum	17 ± 1.6	0.2
Fat Body	274 ± 88	3.7	15 ± 4.8	1.0
Male Gonads	448 ± 148	6.0
Female Gonads	394 ± 63	5.3
Carcass	66 ± 14	0.9	32 ± 1.7	2.2

Whole Body	74 ± 6.5		15 ± 4.3

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC012080-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC012080	106 ± 14	35 ± 7.6	9.0 ± 0.4	19 ± 2.3

TC012080-RA	106 ± 14	35 ± 7.6	9.0 ± 0.4	19 ± 2.3