BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC012166
Symbol
 Lkb1
Product
 polarization-related protein LKB1
NCBI Equivalent
662493
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head6.1 ± 0.70.98.6 ± 1.31.6
Brain24 ± 2.53.310 ± 0.71.9
Anterior Midgut8.5 ± 1.71.28.6 ± 3.31.6
Posterior Midgut8.1 ± 1.91.17.9 ± 1.11.5
Hindgut8.2 ± 1.71.17.6 ± 0.41.4
Tubules (Free)6.1 ± 1.00.95.3 ± 0.81.0
Perirectal Tubules11 ± 0.81.5  
Rectum9.8 ± 0.41.4  
Rectal complex10 ± 0.61.46.1 ± 0.81.1
Fat Body10 ± 1.11.46.5 ± 2.41.2
Male Gonads18 ± 5.02.5  
Female Gonads37 ± 4.45.1  
Carcass8.9 ± 1.21.26.5 ± 1.71.2
Whole Body7.2 ± 1.35.3 ± 1.7
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC012166-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC01216621 ± 0.78.5 ± 1.04.3 ± 0.63.7 ± 0.6
TC012166-RA21 ± 0.78.5 ± 1.04.3 ± 0.63.7 ± 0.6
0–1 h1–24 h24–36 h36–72 h051015202530FPKM