BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC012184

Symbol
pont

Product
pontin

NCBI Equivalent
660254

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	5.6 ± 0.7	0.2	12 ± 1.3	1.6
Brain	4.3 ± 0.2	0.2	7.6 ± 1.4	1.1
Anterior Midgut	16 ± 0.6	0.6	9.8 ± 1.4	1.4
Posterior Midgut	14 ± 1.1	0.6	9.8 ± 0.3	1.4
Hindgut	5.3 ± 0.7	0.2	6.7 ± 1.0	0.9
Tubules (Free)	5.0 ± 0.2	0.2	6.0 ± 0.2	0.8
Perirectal Tubules	6.5 ± 0.6	0.3
Rectum	6.8 ± 0.7	0.3
Rectal complex	6.3 ± 0.1	0.3	7.6 ± 1.3	1.1
Fat Body	25 ± 14	1.0	5.2 ± 1.4	0.7
Male Gonads	68 ± 12	2.7
Female Gonads	12 ± 1.9	0.5
Carcass	5.1 ± 1.3	0.2	5.0 ± 0.8	0.7

Whole Body	25 ± 4.5		7.2 ± 1.0

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC012184-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC012184	17 ± 0.1	37 ± 2.2	48 ± 2.8	22 ± 2.6

TC012184-RA	17 ± 0.1	37 ± 2.2	48 ± 2.8	22 ± 2.6