BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC012191
Symbol
 cdi
Product
 LIM domain kinase 1-like Protein
NCBI Equivalent
659807
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head12 ± 1.31.016 ± 2.71.8
Brain6.8 ± 0.30.65.0 ± 0.10.5
Anterior Midgut3.8 ± 0.10.37.5 ± 1.50.8
Posterior Midgut3.5 ± 0.60.36.1 ± 0.90.7
Hindgut4.4 ± 0.60.48.4 ± 2.50.9
Tubules (Free)19 ± 6.11.714 ± 0.51.5
Perirectal Tubules7.8 ± 2.80.7  
Rectum15 ± 0.91.3  
Rectal complex10 ± 1.10.99.8 ± 0.31.0
Fat Body5.4 ± 1.40.51.1 ± 0.30.1
Male Gonads9.2 ± 1.60.8  
Female Gonads4.6 ± 0.40.4  
Carcass6.2 ± 0.90.58.6 ± 5.90.9
Whole Body11 ± 0.69.4 ± 2.2
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC012191-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0121916.7 ± 0.84.5 ± 1.43.9 ± 1.93.5 ± 1.1
TC012191-RA6.7 ± 0.84.5 ± 1.43.9 ± 1.93.5 ± 1.1
0–1 h1–24 h24–36 h36–72 h0246810FPKM