BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC012192

Symbol
DCP1

NCBI Equivalent
659670

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	7.7 ± 0.4	1.2	7.7 ± 0.2	1.0
Brain	29 ± 1.4	4.3	15 ± 1.4	2.0
Anterior Midgut	12 ± 2.2	1.8	11 ± 1.3	1.5
Posterior Midgut	13 ± 2.6	2.0	15 ± 3.1	1.9
Hindgut	14 ± 3.8	2.2	12 ± 2.1	1.6
Tubules (Free)	7.3 ± 0.9	1.1	7.5 ± 0.6	1.0
Perirectal Tubules	9.3 ± 0.9	1.4
Rectum	9.1 ± 0.3	1.4
Rectal complex	5.4 ± 0.5	0.8	6.6 ± 0.5	0.9
Fat Body	12 ± 2.8	1.7	23 ± 4.7	3.0
Male Gonads	19 ± 1.1	2.9
Female Gonads	55 ± 22	8.3
Carcass	15 ± 3.7	2.2	12 ± 2.4	1.5

Whole Body	6.6 ± 0.2		7.6 ± 2.1

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC012192-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC012192	13 ± 0.7	14 ± 1.1	15 ± 1.1	10 ± 1.4

TC012192-RA	13 ± 0.7	14 ± 1.1	15 ± 1.1	10 ± 1.4