BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC012354
Symbol
 sud1
Product
 Prolyl 3-hydroxylase sudestada1-like Protein
NCBI Equivalent
100141799
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head4.6 ± 0.50.86.7 ± 0.51.3
Brain5.5 ± 0.31.05.2 ± 0.81.0
Anterior Midgut4.8 ± 0.40.92.6 ± 0.00.5
Posterior Midgut4.1 ± 0.40.83.3 ± 0.60.6
Hindgut2.7 ± 0.30.52.5 ± 0.40.5
Tubules (Free)5.3 ± 0.31.05.2 ± 0.61.0
Perirectal Tubules2.4 ± 0.20.4  
Rectum3.0 ± 0.30.6  
Rectal complex3.4 ± 0.20.64.0 ± 0.30.8
Fat Body3.8 ± 0.10.73.4 ± 1.20.7
Male Gonads4.0 ± 0.50.7  
Female Gonads7.0 ± 1.11.3  
Carcass2.8 ± 0.50.53.7 ± 1.00.7
Whole Body5.4 ± 0.45.2 ± 0.4
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC012354-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0123544.5 ± 0.63.0 ± 0.22.7 ± 0.32.3 ± 0.5
TC012354-RA4.5 ± 0.63.0 ± 0.22.7 ± 0.32.3 ± 0.5
0–1 h1–24 h24–36 h36–72 h0246810FPKM