BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC012389

Symbol
arm2

Product
armadillo-2

NCBI Equivalent
660679

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	7.9 ± 1.1	1.1	12 ± 1.4	1.0
Brain	18 ± 0.3	2.5	16 ± 1.0	1.2
Anterior Midgut	25 ± 2.0	3.5	27 ± 3.1	2.1
Posterior Midgut	28 ± 5.6	3.9	27 ± 4.0	2.1
Hindgut	7.4 ± 2.4	1.0	13 ± 0.4	1.0
Tubules (Free)	26 ± 0.7	3.6	25 ± 0.5	1.9
Perirectal Tubules	20 ± 1.6	2.8
Rectum	14 ± 1.2	2.0
Rectal complex	13 ± 2.5	1.9	15 ± 2.2	1.1
Fat Body	10 ± 3.1	1.4	7.2 ± 3.1	0.6
Male Gonads	4.3 ± 0.7	0.6
Female Gonads	18 ± 2.6	2.6
Carcass	5.7 ± 0.8	0.8	8.8 ± 4.6	0.7

Whole Body	7.2 ± 1.3		13 ± 3.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC012389-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC012389	4.7 ± 1.1	6.3 ± 0.8	8.2 ± 0.9	7.9 ± 2.2

TC012389-RA	4.7 ± 1.1	6.3 ± 0.8	8.2 ± 0.9	7.9 ± 2.2